Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006035.1 Corchorus capsularis cultivar CVL-1 contig06053, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34548

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6747--7024
153
1.9
147
86
8
400
32
23
12
32
1.91
9885--9963
31
2.5
31
88
8
133
30
12
21
35
1.91
11203--11265
31
2.0
31
96
0
117
41
22
17
19
1.90
20817--20841
1
25.0
1
100
0
50
0
0
0
100
0.00
26983--27286
168
1.8
168
85
5
427
26
31
25
16
1.97
27175--27450
151
1.8
151
80
6
335
30
30
21
17
1.96

Tables:   1

The End!