Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006037.1 Corchorus capsularis cultivar CVL-1 contig06055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36306

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2569--2633
21
3.1
19
74
20
58
12
16
9
61
1.55
2846--3009
82
2.0
82
96
2
303
48
7
7
36
1.60
2983--3021
2
19.5
2
89
0
60
51
5
0
43
1.24
9063--9123
28
2.2
28
85
5
79
32
4
6
55
1.47
12140--12235
24
4.1
24
85
8
135
40
17
14
27
1.89
17351--17385
17
2.0
18
88
5
54
37
34
20
8
1.83
18157--18204
15
3.0
16
78
9
62
39
14
27
18
1.90
18138--18204
36
2.0
33
88
11
100
38
14
28
17
1.90
18836--18896
22
2.8
22
84
0
77
24
34
21
19
1.96
29129--29191
22
2.9
22
83
9
83
23
36
22
17
1.95
29695--29725
3
10.3
3
100
0
62
67
0
0
32
0.91

Tables:   1

The End!