Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006041.1 Corchorus capsularis cultivar CVL-1 contig06059, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23100

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1444--1501
27
2.1
28
87
3
82
48
20
17
13
1.81
4118--4159
13
3.3
13
81
18
61
47
21
9
21
1.79
4120--4160
12
3.3
12
81
18
57
46
21
9
21
1.80
4112--4160
25
2.0
25
100
0
98
44
20
12
22
1.84
11752--11792
12
3.3
12
90
6
64
34
12
21
31
1.91
19081--19106
11
2.4
11
100
0
52
34
38
19
7
1.80
19135--19174
19
2.1
19
86
9
55
52
0
0
47
1.00
19178--19210
16
2.1
16
88
5
50
33
0
0
66
0.92

Tables:   1

The End!