Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006046.1 Corchorus capsularis cultivar CVL-1 contig06064, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55317

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
960--1005
22
2.1
22
100
0
92
17
17
13
52
1.75
9575--9613
19
2.0
20
85
5
53
35
20
0
43
1.52
21455--21582
64
2.0
64
100
0
256
35
15
10
37
1.83
22054--22123
34
2.1
34
94
0
122
34
1
21
42
1.62
23722--23777
27
2.1
27
93
0
94
35
23
12
28
1.91
23953--24303
176
2.0
176
99
0
693
40
19
13
26
1.88
29984--30008
6
4.2
6
100
0
50
32
52
16
0
1.44

Tables:   1

The End!