Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006056.1 Corchorus capsularis cultivar CVL-1 contig06074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9444

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2090--2126
2
18.5
2
100
0
74
48
0
0
51
1.00
3354--3615
109
2.4
109
93
3
434
38
11
1
48
1.50
6777--6818
20
2.2
20
86
4
59
21
7
7
64
1.43
6918--6960
18
2.2
20
88
8
63
41
4
2
51
1.35
7381--9422
866
2.4
863
89
3
3104
34
14
15
35
1.88

Tables:   1

The End!