Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006060.1 Corchorus capsularis cultivar CVL-1 contig06078, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36143

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7495--7566
28
2.5
28
82
14
94
45
13
20
19
1.84
13576--13618
12
3.7
12
87
3
61
41
9
0
48
1.35
13583--13618
2
17.5
2
88
5
54
44
5
0
50
1.25
13713--13938
70
3.1
69
85
10
308
37
13
0
49
1.43
13713--13944
78
3.1
77
91
6
354
37
13
0
49
1.42
15491--15551
31
2.0
31
100
0
122
42
22
14
19
1.88
20694--20795
31
3.4
30
66
15
84
25
21
18
34
1.96
21869--21923
26
2.1
26
86
6
76
27
14
7
50
1.69
35854--35948
48
2.0
48
89
4
147
49
5
8
36
1.56

Tables:   1

The End!