Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006066.1 Corchorus capsularis cultivar CVL-1 contig06084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28068

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--45
1
42.0
1
100
0
84
100
0
0
0
0.00
2412--2477
29
2.3
29
84
5
80
33
0
7
59
1.26
4509--4549
20
2.0
20
100
0
82
48
14
17
19
1.81
4509--4558
20
2.5
20
90
6
66
48
18
16
18
1.82
19915--20706
262
3.0
262
96
2
1498
38
23
7
29
1.82
20590--20934
114
3.0
114
99
0
681
49
24
3
22
1.65

Tables:   1

The End!