Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006068.1 Corchorus capsularis cultivar CVL-1 contig06086, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44452

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66--227
31
5.3
31
85
0
200
16
24
24
35
1.95
33--227
62
3.2
62
82
2
216
18
23
23
34
1.96
25--227
93
2.2
91
79
3
219
17
22
23
36
1.95
3609--3633
1
25.0
1
100
0
50
0
0
0
100
0.00
8798--8831
1
34.0
1
93
0
59
0
2
0
97
0.19
9926--9960
1
35.0
1
94
0
61
0
2
0
97
0.19
16891--16932
22
2.0
22
90
9
70
40
19
23
16
1.91
42357--42384
12
2.3
12
100
0
56
0
17
32
50
1.47
43489--43585
37
2.6
37
80
4
124
16
18
9
55
1.67

Tables:   1

The End!