Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006071.1 Corchorus capsularis cultivar CVL-1 contig06089, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18032

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5319--5416
30
3.2
30
78
13
110
20
15
28
35
1.93
5402--5554
26
5.5
25
64
24
67
20
13
26
39
1.89
5338--5554
113
1.9
117
84
7
302
20
14
26
38
1.91
5332--5554
57
3.9
57
86
5
281
20
14
26
38
1.91
11667--11693
13
2.1
13
100
0
54
48
7
14
29
1.71
13111--13186
32
2.4
32
93
0
125
31
26
27
14
1.95
13481--13525
20
2.2
21
84
4
56
31
20
6
42
1.77
13659--14077
66
6.3
66
85
2
427
37
16
20
24
1.93
17634--17711
40
1.9
41
84
2
104
42
24
21
11
1.86
17678--17755
30
2.6
30
79
2
86
33
26
25
14
1.94

Tables:   1

The End!