Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006075.1 Corchorus capsularis cultivar CVL-1 contig06093, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5713

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
241--449
111
1.9
111
80
0
247
30
20
22
26
1.98
11--4427
427
10.4
425
81
7
2395
27
21
21
29
1.99
903--1338
158
2.8
158
89
0
651
25
21
22
30
1.99
1255--1462
111
1.9
111
80
4
249
28
21
22
27
1.99
373--1758
585
2.4
583
88
2
2012
27
21
21
28
1.99
1108--2877
427
4.2
427
93
0
2845
27
22
21
28
1.99
2342--2641
157
1.9
156
82
8
369
27
23
21
28
1.99
2516--3118
265
2.3
265
85
4
802
28
21
22
27
1.99

Tables:   1

The End!