Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006093.1 Corchorus capsularis cultivar CVL-1 contig06111, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12712

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2379--2413
16
2.2
16
90
10
54
45
8
0
45
1.34
6681--6746
30
2.2
29
81
7
78
42
4
16
36
1.69
6693--6759
30
2.2
30
86
0
89
40
2
14
41
1.62
6860--7023
51
3.2
50
78
10
129
43
6
16
32
1.74
7736--7848
39
2.9
39
89
1
163
17
27
19
35
1.94
7693--8316
41
14.9
40
73
13
345
16
25
20
38
1.92
7689--8222
167
3.2
167
80
7
410
16
25
20
37
1.93
7979--8197
87
2.6
88
77
11
208
15
24
21
38
1.92
8067--8265
80
2.5
79
78
8
197
14
24
21
39
1.91
8232--8453
47
4.7
45
78
11
164
13
26
19
40
1.88

Tables:   1

The End!