Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006095.1 Corchorus capsularis cultivar CVL-1 contig06113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26294

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
205--248
23
2.0
22
95
4
79
40
0
15
43
1.47
4380--4404
12
2.1
12
100
0
50
32
0
40
28
1.57
9814--9881
33
2.1
33
100
0
136
25
5
20
48
1.72
15740--15767
13
2.2
13
100
0
56
0
14
0
85
0.59
17888--17944
28
2.0
27
83
12
71
54
1
17
26
1.53
18859--18917
29
1.9
32
90
10
97
30
3
22
44
1.69
19078--19129
22
2.3
23
90
3
79
26
7
1
63
1.32

Tables:   1

The End!