Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006100.1 Corchorus capsularis cultivar CVL-1 contig06118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2891

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
483--701
111
2.0
111
80
7
248
30
21
20
27
1.98
771--830
30
2.0
30
83
6
77
33
25
21
20
1.97
1040--1469
157
2.7
156
82
6
515
27
22
20
28
1.99
1044--1498
161
2.9
157
80
5
504
27
22
20
29
1.99
1207--2750
427
3.6
427
85
2
1877
28
22
21
28
1.99
2247--2465
111
2.0
111
81
1
260
29
22
21
26
1.99
2381--2890
159
3.2
159
81
3
499
29
22
20
27
1.99

Tables:   1

The End!