Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006107.1 Corchorus capsularis cultivar CVL-1 contig06125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12900

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6760--6863
52
2.0
52
86
0
145
27
22
26
23
1.99
9851--9876
12
2.2
12
100
0
52
23
0
26
50
1.50
10658--10712
17
3.2
17
89
5
76
30
9
3
56
1.48
10801--10847
24
2.0
24
87
8
69
25
12
4
57
1.54
10801--10867
24
2.8
23
82
6
62
23
10
2
62
1.41
10842--10890
26
1.9
25
88
12
73
22
6
2
69
1.21

Tables:   1

The End!