Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006113.1 Corchorus capsularis cultivar CVL-1 contig06131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20670

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3071--3231
84
1.9
82
87
2
232
32
19
4
43
1.71
3414--3441
14
2.0
14
100
0
56
28
14
7
50
1.69
4751--4784
18
1.9
18
88
5
52
8
17
2
70
1.25
6286--6322
13
2.8
13
95
4
65
21
8
16
54
1.68
6325--6380
7
7.6
7
86
9
76
16
1
14
67
1.31
6630--6691
29
2.1
30
87
3
90
38
20
6
33
1.79
11615--11671
29
2.0
29
85
0
78
40
3
21
35
1.70
11628--11689
30
2.1
29
87
3
88
33
6
20
38
1.79
16390--16450
10
5.7
10
76
14
59
77
0
19
3
0.91

Tables:   1

The End!