Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006114.1 Corchorus capsularis cultivar CVL-1 contig06132, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34557

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--26
1
25.0
1
100
0
50
100
0
0
0
0.00
750--783
12
2.8
12
100
0
68
52
23
8
14
1.69
6372--6418
15
3.1
16
79
14
55
51
0
0
48
1.00
14781--14820
6
6.3
6
88
11
62
2
15
0
82
0.77
16644--16701
30
1.9
30
89
0
89
29
17
17
36
1.92
17917--17974
29
2.1
29
80
6
66
41
22
5
31
1.76
22728--22878
75
2.0
75
100
0
302
37
13
10
39
1.79
26154--26228
15
5.0
15
90
0
123
32
37
6
24
1.81
26154--26228
30
2.5
30
97
0
141
32
37
6
24
1.81
26215--26304
45
2.0
45
86
0
126
40
26
7
25
1.83
33758--33796
17
2.3
17
95
0
69
28
41
5
25
1.77
33947--34003
20
2.8
20
97
0
105
33
28
14
24
1.94

Tables:   1

The End!