Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006116.1 Corchorus capsularis cultivar CVL-1 contig06134, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20043

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1225--1255
1
31.0
1
93
0
53
0
0
3
96
0.21
4974--5046
28
2.5
30
86
4
96
17
8
17
56
1.65
10157--10210
27
2.0
27
85
3
74
40
9
1
48
1.46
15137--15349
105
2.0
105
98
0
408
43
26
9
19
1.82
15864--15909
22
2.1
22
100
0
92
26
0
4
69
1.07
17989--18078
27
3.3
26
87
4
126
17
11
52
18
1.74
18045--18114
18
3.9
18
73
0
59
12
12
55
18
1.68

Tables:   1

The End!