Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006124.1 Corchorus capsularis cultivar CVL-1 contig06142, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26126

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
195--349
70
2.2
70
89
2
231
49
0
12
36
1.46
11986--12036
6
8.5
6
95
0
93
66
0
13
19
1.24
11983--12042
18
3.3
18
92
0
102
65
0
11
23
1.26
12034--12070
2
18.5
2
100
0
74
51
0
0
48
1.00
14173--14262
32
2.8
32
88
5
119
44
4
18
32
1.70
25291--25351
31
2.0
31
93
0
104
22
19
19
37
1.94

Tables:   1

The End!