Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006131.1 Corchorus capsularis cultivar CVL-1 contig06149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17338

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--42
2
14.0
2
100
0
56
50
0
0
50
1.00
709--734
2
13.0
2
100
0
52
50
0
0
50
1.00
7067--7106
21
1.9
21
94
0
71
45
10
42
2
1.51
8658--8791
60
2.2
60
86
2
180
34
13
19
32
1.91
8850--8982
61
2.2
60
89
1
194
35
19
14
30
1.92
17278--17331
2
27.0
2
100
0
108
50
0
50
0
1.00

Tables:   1

The End!