Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006133.1 Corchorus capsularis cultivar CVL-1 contig06151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23001

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
287--378
31
3.0
30
81
9
105
34
21
25
18
1.96
358--401
18
2.4
18
80
3
52
40
18
22
18
1.91
327--426
49
2.1
48
84
5
130
39
22
21
18
1.93
1168--1228
30
2.0
30
90
0
95
18
36
6
39
1.76
1384--1410
2
13.5
2
100
0
54
51
0
0
48
1.00
1432--1457
2
13.0
2
100
0
52
50
0
0
50
1.00
9654--9715
30
2.1
30
100
0
124
37
19
12
30
1.89
21606--21641
17
2.0
19
89
10
58
11
5
22
61
1.50

Tables:   1

The End!