Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006143.1 Corchorus capsularis cultivar CVL-1 contig06161, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15353

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
624--723
31
3.3
31
73
10
98
26
18
17
39
1.91
624--782
60
2.7
60
85
2
203
28
18
15
37
1.91
1196--1286
44
2.1
44
85
0
119
24
24
9
41
1.85
7705--7738
11
3.2
11
87
8
52
20
0
5
73
1.04
9914--9956
21
2.0
21
82
8
52
34
23
18
23
1.96

Tables:   1

The End!