Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006149.1 Corchorus capsularis cultivar CVL-1 contig06167, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31457

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
354--434
41
2.0
41
92
0
135
19
17
13
49
1.79
3675--3736
32
2.0
32
87
3
90
32
16
12
38
1.86
7155--7234
28
2.8
28
86
5
106
25
21
13
40
1.90
7921--7978
29
2.0
29
96
0
107
43
13
18
24
1.87
9179--9258
12
7.0
12
73
13
71
48
2
0
48
1.14
9346--9385
8
4.9
8
87
6
62
40
45
12
2
1.56
13544--13740
31
6.5
30
73
15
165
34
18
19
26
1.96
13548--13710
60
2.7
60
91
1
247
34
19
19
26
1.96
13769--13937
31
5.6
31
70
16
147
26
21
19
32
1.97
13772--13933
60
2.7
60
92
0
270
25
21
19
33
1.97
15031--15080
25
2.0
25
92
3
84
16
20
30
34
1.94
18175--18234
15
4.1
14
74
19
59
0
16
5
78
0.92
21153--21193
21
2.0
21
90
0
64
12
29
14
43
1.82
22693--22718
3
8.7
3
100
0
52
30
0
0
69
0.89
25930--25959
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!