Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006152.1 Corchorus capsularis cultivar CVL-1 contig06170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18468

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
831--878
20
2.3
21
79
13
55
6
14
2
77
1.06
831--877
22
2.1
22
85
14
62
6
12
2
78
1.02
10384--10552
86
2.0
86
98
0
329
14
9
15
59
1.60
10413--10539
29
4.4
29
62
13
73
13
11
17
58
1.63
10417--10551
43
3.1
43
67
19
127
14
9
17
58
1.62
10605--10648
21
2.1
21
83
8
54
25
9
25
40
1.84
13607--13654
19
2.3
22
82
10
57
20
4
4
70
1.21
14864--14896
2
16.5
2
93
0
57
48
0
0
51
1.00
14865--14901
12
3.1
12
92
0
56
43
0
2
54
1.14
16130--16165
18
2.0
18
88
0
54
30
5
30
33
1.81

Tables:   1

The End!