Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006159.1 Corchorus capsularis cultivar CVL-1 contig06177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11602

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1397--1442
22
2.1
22
96
4
85
32
21
8
36
1.84
1788--1834
14
3.5
13
80
11
51
78
14
2
4
0.99
1788--1834
20
2.3
20
85
7
60
78
14
2
4
0.99
1792--1834
6
6.7
6
82
12
50
79
13
2
4
1.00
5502--5567
33
2.0
33
100
0
132
24
9
18
48
1.76
5985--6018
17
2.0
17
94
0
59
73
5
0
20
1.04
6005--6437
217
2.0
214
92
2
724
35
12
17
34
1.88
9224--9311
45
2.0
43
91
6
142
37
22
5
34
1.78

Tables:   1

The End!