Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006176.1 Corchorus capsularis cultivar CVL-1 contig06194, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25524

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210--244
2
17.5
2
100
0
70
51
0
0
48
1.00
2903--3054
74
2.1
74
90
5
236
38
9
28
23
1.85
4499--4540
17
2.3
18
84
8
50
42
11
4
40
1.63
6800--6829
2
15.5
2
93
6
53
46
0
0
53
1.00
9886--9939
27
2.0
27
100
0
108
33
14
3
48
1.62
9909--10176
132
2.0
132
99
0
527
37
16
13
33
1.87
12564--12612
23
2.1
25
85
14
70
59
2
6
32
1.34
12721--12772
20
2.6
20
87
0
86
42
7
21
28
1.80
14724--14758
16
2.2
16
100
0
70
25
0
17
57
1.40
16644--16714
37
1.9
37
94
0
124
29
23
11
35
1.90
16711--16790
41
2.0
41
89
0
124
32
12
12
42
1.80
19098--19138
21
2.0
21
95
4
75
24
9
9
56
1.62
20691--20718
5
5.6
5
100
0
56
39
21
0
39
1.54
21654--21692
2
19.5
2
100
0
78
48
51
0
0
1.00

Tables:   1

The End!