Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006194.1 Corchorus capsularis cultivar CVL-1 contig06212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30405

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4347--4703
156
2.3
155
77
6
357
34
19
14
30
1.92
5756--5822
32
2.1
32
100
0
134
38
34
5
20
1.77
9076--9270
57
3.5
56
85
7
270
41
20
21
16
1.90
12104--12195
48
1.9
48
95
4
168
41
27
10
20
1.86
20606--20638
9
3.8
9
92
4
50
78
0
12
9
0.95
20743--20783
21
2.0
22
90
9
68
36
9
14
39
1.79

Tables:   1

The End!