Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006195.1 Corchorus capsularis cultivar CVL-1 contig06213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14471

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3399--4104
204
3.6
194
84
6
881
34
12
18
34
1.89
4691--4721
16
1.9
16
93
0
53
54
0
9
35
1.33
5210--5255
17
2.8
16
90
6
74
56
28
8
6
1.54
5207--5266
16
3.7
16
75
4
66
50
31
11
6
1.65
5466--5621
32
4.8
32
89
4
197
42
35
8
13
1.74
9252--9294
5
8.8
5
87
5
52
83
2
2
11
0.83
9250--9296
15
3.4
14
82
8
60
85
2
2
10
0.78
9252--9298
24
2.0
24
83
8
60
82
2
4
10
0.88
9295--9327
3
11.7
3
87
12
52
72
0
27
0
0.85
10055--10174
52
2.3
52
92
4
197
33
13
15
38
1.86
13724--13763
21
2.0
21
90
5
64
30
17
5
47
1.69
14065--14118
22
2.5
22
84
0
63
40
11
11
37
1.76
14268--14300
2
16.5
2
93
0
57
48
3
0
48
1.17

Tables:   1

The End!