Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006198.1 Corchorus capsularis cultivar CVL-1 contig06216, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43637

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7447--7986
157
3.5
153
80
8
574
30
14
20
34
1.93
8586--8612
6
4.5
6
100
0
54
55
14
0
29
1.40
8609--8643
13
2.7
13
95
0
61
60
8
11
20
1.57
16545--16613
35
2.0
35
91
0
111
49
7
11
31
1.66
18374--18414
11
3.7
11
87
12
66
46
29
9
14
1.77
18367--18416
22
2.3
22
96
0
91
50
24
12
14
1.76
26494--26522
13
2.2
13
100
0
58
72
0
6
20
1.07
26749--26781
17
1.9
17
93
0
57
18
21
24
36
1.95
27512--27582
33
2.2
33
84
0
88
16
35
30
16
1.92
40926--40981
29
1.9
28
82
13
69
23
8
16
51
1.72

Tables:   1

The End!