Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006199.1 Corchorus capsularis cultivar CVL-1 contig06218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68221

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6057--6322
132
2.0
132
95
0
478
27
19
11
41
1.85
12920--13077
83
1.9
83
100
0
316
12
16
19
51
1.75
15917--15956
1
40.0
1
94
0
71
0
0
2
97
0.17
15912--15955
21
2.1
21
95
0
79
2
0
4
93
0.42
21809--21846
2
19.0
2
94
0
67
0
47
0
52
1.00
26009--26033
2
12.5
2
100
0
50
0
48
0
52
1.00
26033--26069
2
18.5
2
88
0
56
43
0
5
51
1.24
29330--29433
33
3.2
33
85
0
154
19
39
29
11
1.87
33153--33182
12
2.5
12
100
0
60
0
13
0
86
0.57
48381--48489
21
5.2
21
69
16
91
22
11
16
50
1.76
48381--48510
42
3.1
42
98
0
251
21
11
16
50
1.76
48401--48511
21
5.3
21
71
16
104
21
11
16
50
1.76
64973--65083
32
3.5
32
85
2
134
25
30
33
10
1.90
65107--65160
22
2.4
23
87
3
74
35
3
5
55
1.41

Tables:   1

The End!