Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000620.1 Corchorus capsularis cultivar CVL-1 contig00620, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16302

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157--201
2
21.0
2
86
13
63
46
0
6
46
1.29
157--204
7
7.3
7
97
2
75
45
0
8
45
1.33
773--806
13
2.6
13
85
0
50
32
0
2
64
1.08
1316--1341
12
2.2
12
100
0
52
23
11
7
57
1.59
1998--2029
15
2.1
15
100
0
64
18
25
28
28
1.98
12791--13362
286
2.0
281
92
5
961
19
20
19
41
1.91
14366--14415
26
1.9
26
91
0
82
38
20
14
28
1.91

Tables:   1

The End!