Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006208.1 Corchorus capsularis cultivar CVL-1 contig06227, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16111

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5452--5483
15
2.0
17
88
11
50
34
6
9
50
1.60
6242--6367
35
3.4
35
70
22
105
37
10
11
40
1.76
6244--6395
75
2.0
75
90
0
241
38
11
12
38
1.79
6250--6419
75
2.3
75
84
4
218
41
11
11
35
1.78
10569--10661
12
7.8
11
75
13
78
38
0
26
34
1.57
10569--10661
24
3.9
24
85
0
132
38
0
26
34
1.57
10569--10661
36
2.6
36
80
10
109
38
0
26
34
1.57
10769--10908
18
7.8
18
71
3
93
26
15
28
29
1.96
10762--10900
27
5.1
27
92
4
228
26
14
29
29
1.95
13388--13475
28
3.2
27
77
6
88
20
13
22
43
1.87
14458--14501
16
2.8
16
85
0
61
47
22
20
9
1.78
15242--15276
14
2.5
14
85
0
52
14
51
0
34
1.42

Tables:   1

The End!