Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006225.1 Corchorus capsularis cultivar CVL-1 contig06244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12185

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
628--676
21
2.3
21
80
16
57
32
14
12
40
1.83
4691--4760
28
2.5
28
86
4
88
51
22
10
15
1.73
5166--5204
20
2.0
20
89
0
60
23
25
28
23
1.99
5262--5741
156
3.0
159
91
5
770
32
19
21
26
1.97
5419--5751
169
2.0
169
95
1
596
32
18
21
27
1.97
7061--7120
7
8.6
7
73
14
52
11
11
0
76
1.02
7061--7121
8
7.5
8
81
15
72
11
11
0
77
1.01
7074--7125
9
5.9
9
84
10
72
13
13
0
73
1.11
7061--7125
17
3.9
17
83
16
84
12
12
0
75
1.05
7425--7490
11
6.1
11
73
25
52
16
0
9
74
1.06
7436--7471
18
1.9
19
94
5
65
16
0
5
77
0.94
7762--7824
14
4.6
14
82
4
65
46
11
4
38
1.61

Tables:   1

The End!