Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006242.1 Corchorus capsularis cultivar CVL-1 contig06261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43430

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
290--319
2
15.0
2
100
0
60
50
0
0
50
1.00
27435--27477
22
2.0
22
81
9
52
11
18
0
69
1.17
38005--38053
25
1.9
26
95
4
91
16
24
22
36
1.94
41300--41370
36
2.0
36
94
0
124
50
12
9
26
1.71
41437--41548
11
10.2
11
89
0
152
48
8
19
23
1.77
41437--41562
22
5.7
22
84
1
146
47
8
19
23
1.77
41437--41562
33
3.8
32
85
2
126
47
8
19
23
1.77
41554--41874
36
9.0
36
87
2
423
41
9
24
24
1.84
41552--41896
142
2.4
141
82
4
458
41
9
24
24
1.84

Tables:   1

The End!