Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006254.1 Corchorus capsularis cultivar CVL-1 contig06273, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27195

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6967--7013
21
2.2
21
96
0
85
27
38
12
21
1.90
7056--7087
15
2.1
15
94
0
55
12
46
3
37
1.57
8155--8208
6
9.0
6
97
0
90
0
16
53
29
1.43
18763--18825
32
2.0
32
90
6
101
30
19
14
36
1.91
24599--25060
8
61.8
8
70
19
72
30
20
4
44
1.71
24613--24862
30
8.0
30
73
15
147
28
20
4
46
1.71
24592--24717
64
2.0
64
82
6
157
28
19
4
46
1.70
24592--25194
22
27.0
22
71
18
176
29
20
4
44
1.72
24715--24901
66
2.9
64
86
4
257
30
21
3
44
1.70
24677--24907
30
7.4
30
74
14
166
30
20
3
45
1.68
24705--24992
66
4.2
65
75
14
212
31
20
4
44
1.70
24998--25061
21
3.0
21
82
13
76
31
21
4
42
1.74
25108--25200
8
11.9
8
78
4
91
29
21
3
46
1.67
24677--25146
30
15.5
30
68
19
146
30
20
4
44
1.73

Tables:   1

The End!