Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006255.1 Corchorus capsularis cultivar CVL-1 contig06274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57241

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4758--4782
11
2.3
11
100
0
50
20
0
8
72
1.10
6315--6421
33
3.2
33
93
0
178
34
8
16
40
1.79
6812--6870
30
2.0
30
90
6
93
30
16
30
22
1.96
17138--17179
21
2.0
21
85
0
57
28
21
9
40
1.84
25473--25520
21
2.3
21
86
13
64
39
4
33
22
1.74
27433--27490
30
1.9
30
85
0
80
22
17
22
37
1.93
33892--33949
30
1.9
30
85
0
80
22
17
22
37
1.93
40342--40381
21
2.0
20
95
5
71
12
25
35
27
1.92
42140--42175
19
1.9
18
88
5
54
41
2
22
33
1.68
47143--47177
17
2.1
17
94
0
61
62
17
8
11
1.52
49534--49573
21
1.9
21
94
0
71
57
12
7
22
1.60
54458--54493
19
1.9
18
88
5
54
33
22
2
41
1.68

Tables:   1

The End!