Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006273.1 Corchorus capsularis cultivar CVL-1 contig06292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65688

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--27
2
13.0
2
100
0
52
50
0
0
50
1.00
871--908
19
2.0
19
100
0
76
78
5
5
10
1.06
2173--2204
2
16.0
2
100
0
64
50
0
0
50
1.00
16014--16043
2
15.0
2
100
0
60
50
0
0
50
1.00
21058--21098
1
41.0
1
100
0
82
100
0
0
0
0.00
25587--25660
37
2.0
37
94
0
130
44
25
6
22
1.77
30734--30901
31
5.5
31
71
16
154
33
20
19
26
1.97
30738--30902
60
2.8
60
91
0
276
33
20
20
26
1.96
30769--30878
29
3.7
28
72
15
96
32
20
20
27
1.97
30933--31096
31
5.4
29
69
13
118
26
18
18
35
1.94
30961--31061
29
3.4
29
70
15
98
25
19
19
34
1.96
30933--31092
60
2.7
60
94
3
270
26
18
18
36
1.94
31285--31328
21
2.1
21
87
8
63
18
38
9
34
1.82
31399--31457
25
2.4
25
91
5
95
35
23
0
40
1.55
31467--31534
26
2.6
26
90
0
109
54
10
1
33
1.43
31467--31585
52
2.4
51
79
13
124
54
10
1
33
1.44
32059--32158
31
3.2
32
83
8
109
34
10
16
40
1.81
38545--38570
2
13.0
2
100
0
52
50
0
0
50
1.00
38885--38910
2
13.0
2
100
0
52
50
0
0
50
1.00
62307--62333
7
3.9
7
100
0
54
44
14
0
40
1.46

Tables:   1

The End!