Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006295.1 Corchorus capsularis cultivar CVL-1 contig06315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45261

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--255
84
3.1
78
86
7
348
48
2
12
37
1.52
5088--5114
6
4.5
6
100
0
54
85
0
0
14
0.61
7746--7806
31
1.9
32
90
3
97
27
19
4
47
1.70
8178--8215
19
2.0
20
85
15
53
28
5
2
63
1.30
8390--8509
22
5.5
22
79
9
120
35
12
16
35
1.87
8380--8563
22
8.3
22
76
11
117
33
9
18
38
1.84
8599--9018
22
18.9
22
69
11
167
39
9
16
35
1.80
9097--9407
22
14.4
22
71
11
155
39
9
15
35
1.80
9307--9391
23
3.7
23
85
1
109
36
8
15
40
1.77
9375--9420
21
2.1
22
84
4
58
36
10
13
39
1.79
9489--9685
22
8.9
22
68
11
89
41
10
12
35
1.78
44805--44830
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!