Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006316.1 Corchorus capsularis cultivar CVL-1 contig06337, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39843

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11385--11438
25
2.2
25
93
0
90
25
42
11
20
1.85
11385--11446
25
2.5
25
89
0
79
25
41
12
19
1.87
11564--11704
66
2.1
66
98
0
273
18
12
14
55
1.69
11938--11968
11
2.8
11
100
0
62
38
6
9
45
1.63
13349--13380
11
2.8
12
86
13
50
34
0
18
46
1.49
15289--15343
21
2.6
21
100
0
110
23
41
21
12
1.88
15621--15663
5
8.8
5
79
5
52
74
20
4
0
1.00
19691--19741
6
8.5
6
100
0
102
31
0
15
52
1.43
29343--29449
30
3.5
30
96
2
196
49
15
15
18
1.80
36066--36093
1
28.0
1
100
0
56
100
0
0
0
0.00
36675--36709
18
2.0
18
88
5
54
5
2
25
65
1.28

Tables:   1

The End!