Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006317.1 Corchorus capsularis cultivar CVL-1 contig06338, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26392

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1395--1422
2
14.0
2
100
0
56
50
0
0
50
1.00
2659--2685
6
4.5
6
100
0
54
70
0
0
29
0.88
3572--3739
31
5.6
30
69
16
123
33
19
19
28
1.96
3576--3736
60
2.7
60
92
0
268
34
18
19
27
1.95
3607--3710
29
3.5
29
70
10
93
33
17
19
29
1.94
8975--9009
15
2.2
16
90
5
54
82
0
11
5
0.82
10183--10304
12
10.2
12
82
0
136
44
4
32
18
1.69
10183--10304
36
3.4
36
83
0
154
44
4
32
18
1.69
13718--13751
8
4.2
8
100
0
68
0
23
26
50
1.50
13887--13960
24
3.1
24
92
1
123
47
24
16
12
1.80
16542--16605
27
2.4
27
97
0
119
32
40
15
10
1.82
17892--17930
19
2.1
19
90
9
62
15
10
17
56
1.66
23032--23064
18
1.9
18
88
11
52
42
0
12
45
1.41

Tables:   1

The End!