Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006320.1 Corchorus capsularis cultivar CVL-1 contig06341, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29290

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
19.0
2
88
11
58
50
0
0
50
1.00
107--151
18
2.4
18
81
7
54
55
8
0
35
1.31
220--292
30
2.4
30
93
0
119
17
27
34
20
1.95
422--446
7
3.6
7
100
0
50
76
0
12
12
1.04
11718--11794
34
2.2
35
88
2
111
16
23
27
32
1.96
15545--15572
1
28.0
1
100
0
56
100
0
0
0
0.00
18080--18169
43
2.1
43
100
0
180
24
23
12
40
1.89
18398--18491
33
2.9
32
78
16
88
13
42
31
11
1.81
18559--18706
32
4.6
32
90
5
228
12
29
42
15
1.84
20180--20226
21
2.2
21
92
0
76
27
25
10
36
1.89
28625--28677
27
2.0
27
85
7
72
47
13
24
15
1.81

Tables:   1

The End!