Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006335.1 Corchorus capsularis cultivar CVL-1 contig06356, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20939

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--49
2
25.5
2
91
8
84
0
51
0
48
1.00
3900--3932
17
1.9
17
100
0
66
30
36
6
27
1.81
5954--5993
16
2.4
18
84
16
59
40
10
10
40
1.72
5957--6011
25
2.2
26
81
12
71
41
10
10
36
1.75
6277--6308
16
2.0
16
100
0
64
31
18
12
37
1.88
8068--8276
70
3.0
70
94
5
390
42
8
22
26
1.82
8068--8267
66
3.0
66
97
2
364
41
9
23
26
1.83
8089--8288
66
3.0
64
85
5
215
43
9
20
27
1.82

Tables:   1

The End!