Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006336.1 Corchorus capsularis cultivar CVL-1 contig06357, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26315

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2537--2568
12
2.7
12
95
0
55
3
15
28
53
1.57
2930--2972
20
2.1
21
86
4
61
20
18
20
39
1.93
2960--3042
42
2.0
43
88
7
125
37
24
15
22
1.93
3529--3585
28
1.9
29
89
10
89
26
3
26
43
1.70
19548--19582
4
8.8
4
100
0
70
74
0
0
25
0.82
20646--20733
44
2.0
44
97
0
167
32
15
21
29
1.95

Tables:   1

The End!