Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006350.1 Corchorus capsularis cultivar CVL-1 contig06371, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29848

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10400--10429
9
3.3
9
100
0
60
30
33
23
13
1.93
10195--10657
246
1.9
246
98
0
890
34
18
22
23
1.96
20484--20519
18
2.1
17
94
5
63
11
16
8
63
1.49
24481--24529
21
2.3
21
82
6
55
14
28
16
40
1.87
27802--27933
71
1.9
71
82
6
169
25
31
12
30
1.93
27835--28002
33
5.1
33
66
16
107
27
27
12
32
1.93

Tables:   1

The End!