Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006357.1 Corchorus capsularis cultivar CVL-1 contig06378, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4339

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2125--2272
32
4.7
32
85
6
171
7
20
38
33
1.81
2127--2272
48
3.1
46
84
11
172
7
20
39
32
1.81
2125--2257
16
8.4
16
86
4
175
7
21
38
33
1.81
2718--2766
21
2.3
22
86
10
75
55
6
6
32
1.49
2870--2983
32
3.6
32
87
7
135
7
19
39
33
1.80
2873--2990
48
2.5
47
82
8
139
8
19
39
32
1.82
2873--2983
16
6.9
16
78
7
118
8
18
39
33
1.81

Tables:   1

The End!