Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006358.1 Corchorus capsularis cultivar CVL-1 contig06379, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36564

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2317--2345
11
2.6
11
100
0
58
27
20
13
37
1.91
3079--3183
33
3.2
33
79
0
111
45
20
6
27
1.75
4893--4925
16
2.1
15
94
5
57
18
0
0
81
0.68
14380--14410
6
5.2
6
100
0
62
48
35
0
16
1.46
14421--14598
38
4.7
38
92
0
284
20
36
19
23
1.95
14765--14798
15
2.2
16
89
5
52
50
8
0
41
1.34
17940--17964
6
4.2
6
100
0
50
48
36
0
16
1.46
17975--18152
38
4.7
38
92
0
284
21
34
19
24
1.96
18319--18352
15
2.2
16
89
5
52
50
8
0
41
1.34

Tables:   1

The End!