Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006359.1 Corchorus capsularis cultivar CVL-1 contig06380, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23178

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2291--2341
21
2.5
20
84
9
66
58
1
35
3
1.28
5281--5403
22
5.5
22
72
5
88
39
9
14
36
1.79
5299--5403
44
2.4
44
80
7
115
38
7
13
40
1.73
20561--20632
11
5.4
15
66
25
54
31
1
12
54
1.47
20565--20632
26
2.6
26
95
0
118
33
1
11
52
1.47
20642--20700
25
2.4
25
91
5
95
40
0
23
35
1.55

Tables:   1

The End!