Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006360.1 Corchorus capsularis cultivar CVL-1 contig06381, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15575

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1279--1327
2
26.0
2
84
12
59
44
0
4
51
1.20
1400--1458
20
3.0
20
78
12
68
54
6
0
38
1.27
1650--1679
6
5.0
6
91
0
51
16
13
66
3
1.37
4571--4621
25
2.0
25
92
0
84
19
9
13
56
1.65
5845--5883
14
2.7
14
96
4
69
0
12
28
58
1.34
6285--6320
18
1.9
19
94
5
65
11
22
33
33
1.89
7907--7959
20
2.6
19
82
11
61
41
1
13
43
1.54
8806--8839
15
2.3
15
95
5
61
52
0
5
41
1.25
11482--11515
3
11.3
3
100
0
68
32
0
0
67
0.91

Tables:   1

The End!