Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006370.1 Corchorus capsularis cultivar CVL-1 contig06391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31947

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1733--1766
17
2.1
16
88
5
50
50
29
11
8
1.69
1889--1930
21
2.0
20
86
4
57
26
21
11
40
1.88
4238--4283
21
2.3
20
82
13
60
32
15
30
21
1.94
4244--4286
21
2.1
21
91
4
70
32
18
25
23
1.97
5925--5993
30
2.3
30
87
7
97
13
10
36
40
1.78
19709--19735
6
4.5
6
100
0
54
70
0
29
0
0.88
31021--31056
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!