Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006374.1 Corchorus capsularis cultivar CVL-1 contig06395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10275

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2976--3010
18
1.9
18
88
0
52
68
2
0
28
1.04
5654--5683
15
2.0
15
93
0
51
66
0
3
30
1.07
6079--6138
29
2.1
29
100
0
120
50
23
0
26
1.50
8835--8874
3
13.3
3
94
0
71
65
2
0
32
1.06
10240--10275
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!