Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006377.1 Corchorus capsularis cultivar CVL-1 contig06398, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2169

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
531--568
18
2.1
18
90
0
58
42
2
21
34
1.67
1943--2039
26
3.6
26
72
22
83
37
28
13
20
1.91
1940--2021
26
3.0
26
75
21
87
35
26
14
23
1.93
1942--2067
56
2.2
56
90
2
191
38
27
12
20
1.89
2113--2169
30
1.9
29
89
3
87
40
28
12
19
1.87
1990--2167
100
1.8
97
86
6
259
38
27
11
22
1.89

Tables:   1

The End!